Semantic Laboratories: Bioinformatics, Cheminformatics and Pharmacoinformatics Integration

LabAutomation 2009

Presentations by Carlos S. Zamudio

Integrating Semantics Into Life Sciences Experiments using RDF, RDFS and OWL.

Ontologies and Semantic Technologies in Drug Discovery

References

X. Wang, R. Gorlitsy, J.S. Almeida, From XML to RDF: how semantic web technologies will change the design of 'omic' standards, Nature Biotechnology Vol 23 Num 9 (2005)

Cover Pages: XML and Semantic Transparency, R. Cover (1998)

A. Ankolekar, M. Krotzsch, T. Tran, D. Vrandecic, The two cultures: Mashing up Web 2.0 and the Semantic Web, World Wide Web Conference 2007

F. Belleau, M. Nolin, N. Tourigny, P. Rigault, J. Morissette, Bio2RDF: Towards a mashup to build bioinformatics knowledge systems, J. Biomed Info 41 (2008) 706-716

K. Cheung, K.Y. Yip, J.P. Townsend, M. Scotch, HCLS 2.0/3.0: Health care and life sciences data mashup using Web 2.0/3.0, J. Biomed Info 41 (2008) 694-705

C. Goble, R. Stevens, State of the Nation in Data Integration for Bioinformatics, J. Biomed Info 41 (2008) 687-693

J. Quackenbush, Standardizing the standards, Molecular Systems Biology (2006)

G. Denker, L. Kagal, T. Finin, Security in the Semantic Web using OWL, Information Security Technical Report (2005) 10, 51-58